Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm16166-201ENSMUST00000118291 787 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm11578-201ENSMUST00000118530 459 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm6644-201ENSMUST00000186507 951 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm8531-201ENSMUST00000188319 893 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Spg11Q3UHA3 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm15352-201ENSMUST00000118696 270 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm8199-201ENSMUST00000121323 823 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm22146-201ENSMUST00000157397 288 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm23085-201ENSMUST00000157849 293 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms