Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Gm15429-201ENSMUST00000151268 798 ntBASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cul4aQ3TCH7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Gm18473-201ENSMUST00000220543 868 ntBASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cul4aQ3TCH7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Gm6152-201ENSMUST00000151704 340 ntBASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Gm44855-201ENSMUST00000205725 362 ntBASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cul4aQ3TCH7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms