Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gm16198-201ENSMUST00000118766 670 ntBASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gm15483-201ENSMUST00000120338 456 ntBASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccbe1Q3MI99 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccbe1Q3MI99 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Mir698-201ENSMUST00000102164 109 ntBASIC11.7□□□□□ -0.54
Ccbe1Q3MI99 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms