Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.72□□□□□ -0.37
Q3KNL4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Q3KNL4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.72□□□□□ -0.37
Q3KNL4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.72□□□□□ -0.37
Q3KNL4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Q3KNL4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.72□□□□□ -0.37
Q3KNL4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Gm6218-201ENSMUST00000219812 628 ntBASIC12.72□□□□□ -0.37
Q3KNL4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.72□□□□□ -0.37
Q3KNL4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.72□□□□□ -0.37
Q3KNL4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.72□□□□□ -0.37
Q3KNL4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Q3KNL4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3KNL4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Q3KNL4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.71□□□□□ -0.37
Q3KNL4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.71□□□□□ -0.37
Q3KNL4 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.71□□□□□ -0.37
Q3KNL4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.71□□□□□ -0.37
Q3KNL4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.71□□□□□ -0.37
Q3KNL4 Gm20949-201ENSMUST00000206478 952 ntBASIC12.71□□□□□ -0.37
Q3KNL4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.71□□□□□ -0.37
Q3KNL4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Q3KNL4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3KNL4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.71□□□□□ -0.38
Q3KNL4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Q3KNL4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Q3KNL4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3KNL4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.71□□□□□ -0.38
Q3KNL4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.7□□□□□ -0.38
Q3KNL4 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.7□□□□□ -0.38
Q3KNL4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Q3KNL4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3KNL4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms