Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptchd3Q0EEE2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Gm28760-201ENSMUST00000185995 736 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms