Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm13492-201ENSMUST00000119772 665 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm24679-201ENSMUST00000158762 111 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm25677-201ENSMUST00000174983 72 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm19587-201ENSMUST00000191395 545 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm25053-202ENSMUST00000199731 132 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm44814-201ENSMUST00000207018 434 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm23680-201ENSMUST00000083162 164 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm23596-201ENSMUST00000104304 132 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm11500-201ENSMUST00000118237 601 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm12030-201ENSMUST00000121917 223 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm24078-201ENSMUST00000158184 103 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm17070-201ENSMUST00000170463 784 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm29651-201ENSMUST00000189088 697 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.48□□□□□ -0.57
Chd8Q09XV5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms