Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.41□□□□□ -0.42
Hoxc4Q08624 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.41□□□□□ -0.42
Hoxc4Q08624 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Gm27243-201ENSMUST00000183964 521 ntBASIC12.41□□□□□ -0.42
Hoxc4Q08624 Gm31256-201ENSMUST00000194705 506 ntBASIC12.41□□□□□ -0.42
Hoxc4Q08624 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc4Q08624 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm13875-201ENSMUST00000120162 282 ntBASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm38241-201ENSMUST00000192641 898 ntBASIC12.4□□□□□ -0.42
Hoxc4Q08624 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.4□□□□□ -0.42
Hoxc4Q08624 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.4□□□□□ -0.42
Hoxc4Q08624 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc4Q08624 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Hoxc4Q08624 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc4Q08624 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc4Q08624 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc4Q08624 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc4Q08624 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms