Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm12684-201ENSMUST00000118675 999 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm29499-201ENSMUST00000189151 486 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm28329-201ENSMUST00000191208 689 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm29171-201ENSMUST00000191397 486 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm4811-201ENSMUST00000220879 1220 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm9884-201ENSMUST00000194343 1222 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Col17a1Q07563 Gm6564-201ENSMUST00000075377 619 ntBASIC19.41■□□□□ 0.7
Col17a1Q07563 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col17a1Q07563 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.4■□□□□ 0.7
Col17a1Q07563 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Gm11500-201ENSMUST00000118237 601 ntBASIC19.4■□□□□ 0.7
Col17a1Q07563 Gm14993-201ENSMUST00000121180 164 ntBASIC19.4■□□□□ 0.7
Col17a1Q07563 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Gm17213-201ENSMUST00000165161 1360 ntBASIC19.4■□□□□ 0.7
Col17a1Q07563 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col17a1Q07563 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col17a1Q07563 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Col17a1Q07563 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 CT571245.2-201ENSMUST00000218421 305 ntBASIC19.4■□□□□ 0.7
Col17a1Q07563 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC19.4■□□□□ 0.7
Col17a1Q07563 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col17a1Q07563 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col17a1Q07563 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col17a1Q07563 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC19.39■□□□□ 0.7
Col17a1Q07563 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col17a1Q07563 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Gm12986-201ENSMUST00000119037 967 ntBASIC19.39■□□□□ 0.69
Col17a1Q07563 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC19.39■□□□□ 0.69
Col17a1Q07563 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC19.39■□□□□ 0.69
Col17a1Q07563 Gm42430-201ENSMUST00000197209 616 ntBASIC19.39■□□□□ 0.69
Col17a1Q07563 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col17a1Q07563 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm6641-201ENSMUST00000196100 1315 ntBASIC19.38■□□□□ 0.69
Col17a1Q07563 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col17a1Q07563 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm11996-201ENSMUST00000117538 915 ntBASIC19.38■□□□□ 0.69
Col17a1Q07563 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.38■□□□□ 0.69
Col17a1Q07563 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm24844-201ENSMUST00000158679 127 ntBASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm37851-201ENSMUST00000193871 889 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms