Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.74□□□□□ -0.37
Sox4Q06831 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sox4Q06831 Gm14704-201ENSMUST00000120300 874 ntBASIC12.74□□□□□ -0.37
Sox4Q06831 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.74□□□□□ -0.37
Sox4Q06831 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.74□□□□□ -0.37
Sox4Q06831 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.74□□□□□ -0.37
Sox4Q06831 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox4Q06831 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox4Q06831 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.73□□□□□ -0.37
Sox4Q06831 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox4Q06831 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.73□□□□□ -0.37
Sox4Q06831 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Sox4Q06831 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.73□□□□□ -0.37
Sox4Q06831 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox4Q06831 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox4Q06831 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox4Q06831 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.73□□□□□ -0.37
Sox4Q06831 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sox4Q06831 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Sox4Q06831 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gm25927-201ENSMUST00000175058 117 ntBASIC12.73□□□□□ -0.37
Sox4Q06831 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.73□□□□□ -0.37
Sox4Q06831 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.73□□□□□ -0.37
Sox4Q06831 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.73□□□□□ -0.37
Sox4Q06831 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Sox4Q06831 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sox4Q06831 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox4Q06831 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox4Q06831 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.72□□□□□ -0.37
Sox4Q06831 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Gm5187-201ENSMUST00000117317 991 ntBASIC12.72□□□□□ -0.37
Sox4Q06831 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox4Q06831 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox4Q06831 Gm6222-202ENSMUST00000182143 629 ntBASIC12.72□□□□□ -0.37
Sox4Q06831 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Sox4Q06831 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.72□□□□□ -0.37
Sox4Q06831 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox4Q06831 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox4Q06831 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox4Q06831 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox4Q06831 Snora73a-201ENSMUST00000082453 205 ntBASIC12.72□□□□□ -0.37
Sox4Q06831 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox4Q06831 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms