Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Npas1P97459 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Gm25287-201ENSMUST00000103846 110 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Gm22918-201ENSMUST00000103855 110 ntBASIC10.87□□□□□ -0.67
Npas1P97459 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Npas1P97459 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Gm15460-201ENSMUST00000118147 391 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.87□□□□□ -0.67
Npas1P97459 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.87□□□□□ -0.67
Npas1P97459 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Gm44335-201ENSMUST00000196879 141 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Gm44297-201ENSMUST00000198304 141 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Gm44346-201ENSMUST00000198851 141 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.87□□□□□ -0.67
Npas1P97459 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.87□□□□□ -0.67
Npas1P97459 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Npas1P97459 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Npas1P97459 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.86□□□□□ -0.67
Npas1P97459 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Npas1P97459 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.86□□□□□ -0.67
Npas1P97459 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Gm24543-201ENSMUST00000103867 82 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Gm13385-201ENSMUST00000121089 220 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Mir1895-201ENSMUST00000122615 79 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Npas1P97459 Gm27525-201ENSMUST00000184465 107 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Gm21470-201ENSMUST00000187680 696 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.86□□□□□ -0.67
Npas1P97459 Gm43474-201ENSMUST00000196415 774 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.86□□□□□ -0.67
Npas1P97459 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Npas1P97459 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Npas1P97459 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Npas1P97459 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Npas1P97459 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.86□□□□□ -0.67
Npas1P97459 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.86□□□□□ -0.67
Npas1P97459 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Npas1P97459 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms