Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC8.53□□□□□ -1.04
PrkdcP97313 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC8.53□□□□□ -1.04
PrkdcP97313 Ighv4-2-201ENSMUST00000192975 362 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 BC106175-202ENSMUST00000219344 1213 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PrkdcP97313 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC8.53□□□□□ -1.04
PrkdcP97313 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
PrkdcP97313 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
PrkdcP97313 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Gm3726-201ENSMUST00000203110 785 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Gm18561-201ENSMUST00000206027 804 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PrkdcP97313 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Gm7537-201ENSMUST00000221660 1414 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PrkdcP97313 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC8.52□□□□□ -1.04
PrkdcP97313 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 Gm23119-201ENSMUST00000158610 140 ntBASIC8.52□□□□□ -1.04
PrkdcP97313 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC8.52□□□□□ -1.04
PrkdcP97313 Gm29304-201ENSMUST00000186555 695 ntBASIC8.52□□□□□ -1.04
PrkdcP97313 Gm29223-201ENSMUST00000188867 695 ntBASIC8.52□□□□□ -1.04
PrkdcP97313 Gm37921-201ENSMUST00000194333 695 ntBASIC8.52□□□□□ -1.04
PrkdcP97313 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC8.52□□□□□ -1.04
PrkdcP97313 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PrkdcP97313 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PrkdcP97313 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC8.52□□□□□ -1.05
PrkdcP97313 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PrkdcP97313 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 AC166836.1-201ENSMUST00000219933 1795 ntBASIC8.52□□□□□ -1.05
PrkdcP97313 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC8.52□□□□□ -1.05
PrkdcP97313 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm23255-201ENSMUST00000102244 110 ntBASIC8.52□□□□□ -1.05
PrkdcP97313 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm11663-201ENSMUST00000117888 290 ntBASIC8.52□□□□□ -1.05
PrkdcP97313 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC8.52□□□□□ -1.05
PrkdcP97313 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PrkdcP97313 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PrkdcP97313 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PrkdcP97313 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
PrkdcP97313 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
PrkdcP97313 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms