Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim43bP86448 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Gm15371-201ENSMUST00000117057 784 ntBASIC13.34□□□□□ -0.27
Trim43bP86448 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim43bP86448 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim43bP86448 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim43bP86448 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim43bP86448 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.34□□□□□ -0.27
Trim43bP86448 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43bP86448 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.34□□□□□ -0.27
Trim43bP86448 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43bP86448 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43bP86448 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43bP86448 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43bP86448 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Trim43bP86448 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.33□□□□□ -0.28
Trim43bP86448 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Matn2-203ENSMUST00000226766 3252 ntBASIC13.33□□□□□ -0.28
Trim43bP86448 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim43bP86448 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim43bP86448 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim43bP86448 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Gm43094-201ENSMUST00000196549 921 ntBASIC13.33□□□□□ -0.28
Trim43bP86448 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.33□□□□□ -0.28
Trim43bP86448 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim43bP86448 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim43bP86448 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim43bP86448 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43bP86448 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43bP86448 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.32□□□□□ -0.28
Trim43bP86448 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.32□□□□□ -0.28
Trim43bP86448 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim43bP86448 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.32□□□□□ -0.28
Trim43bP86448 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim43bP86448 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim43bP86448 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.32□□□□□ -0.28
Trim43bP86448 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Trim43bP86448 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.32□□□□□ -0.28
Trim43bP86448 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.32□□□□□ -0.28
Trim43bP86448 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms