Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
H3f3aP84244 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.54□□□□□ -0.56
H3f3aP84244 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.54□□□□□ -0.56
H3f3aP84244 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.54□□□□□ -0.56
H3f3aP84244 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.54□□□□□ -0.56
H3f3aP84244 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.54□□□□□ -0.56
H3f3aP84244 Gm7029-201ENSMUST00000173226 450 ntBASIC11.54□□□□□ -0.56
H3f3aP84244 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.54□□□□□ -0.56
H3f3aP84244 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
H3f3aP84244 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.54□□□□□ -0.56
H3f3aP84244 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
H3f3aP84244 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.54□□□□□ -0.56
H3f3aP84244 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H3f3aP84244 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
H3f3aP84244 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.53□□□□□ -0.56
H3f3aP84244 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
H3f3aP84244 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
H3f3aP84244 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
H3f3aP84244 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
H3f3aP84244 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
H3f3aP84244 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Gm12384-201ENSMUST00000119228 919 ntBASIC11.53□□□□□ -0.56
H3f3aP84244 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.53□□□□□ -0.56
H3f3aP84244 Gm27682-201ENSMUST00000183930 110 ntBASIC11.53□□□□□ -0.56
H3f3aP84244 Gm37042-201ENSMUST00000193816 581 ntBASIC11.53□□□□□ -0.56
H3f3aP84244 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.53□□□□□ -0.56
H3f3aP84244 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.53□□□□□ -0.56
H3f3aP84244 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
H3f3aP84244 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.53□□□□□ -0.56
H3f3aP84244 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
H3f3aP84244 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms