Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SgcbP82349 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
SgcbP82349 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.57□□□□□ -0.56
SgcbP82349 Gm12742-201ENSMUST00000117326 410 ntBASIC11.57□□□□□ -0.56
SgcbP82349 Gm14660-201ENSMUST00000119809 575 ntBASIC11.57□□□□□ -0.56
SgcbP82349 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.57□□□□□ -0.56
SgcbP82349 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.57□□□□□ -0.56
SgcbP82349 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.57□□□□□ -0.56
SgcbP82349 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.57□□□□□ -0.56
SgcbP82349 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SgcbP82349 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SgcbP82349 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SgcbP82349 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SgcbP82349 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.57□□□□□ -0.56
SgcbP82349 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
SgcbP82349 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
SgcbP82349 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SgcbP82349 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.56□□□□□ -0.56
SgcbP82349 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SgcbP82349 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.56□□□□□ -0.56
SgcbP82349 Gm16479-201ENSMUST00000121706 932 ntBASIC11.56□□□□□ -0.56
SgcbP82349 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcbP82349 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcbP82349 Gm42660-201ENSMUST00000197733 947 ntBASIC11.56□□□□□ -0.56
SgcbP82349 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.56□□□□□ -0.56
SgcbP82349 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcbP82349 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.56□□□□□ -0.56
SgcbP82349 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgcbP82349 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgcbP82349 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcbP82349 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms