Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx3P70354 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Msx3P70354 Gm11918-201ENSMUST00000121660 179 ntBASIC13.3□□□□□ -0.28
Msx3P70354 Gm10156-201ENSMUST00000122364 462 ntBASIC13.3□□□□□ -0.28
Msx3P70354 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Msx3P70354 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.3□□□□□ -0.28
Msx3P70354 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.3□□□□□ -0.28
Msx3P70354 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.3□□□□□ -0.28
Msx3P70354 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Msx3P70354 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Msx3P70354 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.3□□□□□ -0.28
Msx3P70354 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.3□□□□□ -0.28
Msx3P70354 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Msx3P70354 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msx3P70354 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.29□□□□□ -0.28
Msx3P70354 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Msx3P70354 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.29□□□□□ -0.28
Msx3P70354 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm13813-201ENSMUST00000120998 787 ntBASIC13.29□□□□□ -0.28
Msx3P70354 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.29□□□□□ -0.28
Msx3P70354 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Proscos-202ENSMUST00000178990 666 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.29□□□□□ -0.28
Msx3P70354 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm37922-201ENSMUST00000195596 455 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Gm45384-201ENSMUST00000210451 277 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.29□□□□□ -0.28
Msx3P70354 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms