Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cux2P70298 Gm26286-201ENSMUST00000104166 134 ntBASIC20.74■□□□□ 0.91
Cux2P70298 Gm16166-201ENSMUST00000118291 787 ntBASIC20.74■□□□□ 0.91
Cux2P70298 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC20.74■□□□□ 0.91
Cux2P70298 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Cux2P70298 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC20.74■□□□□ 0.91
Cux2P70298 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 CT571245.2-201ENSMUST00000218421 305 ntBASIC20.74■□□□□ 0.91
Cux2P70298 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC20.74■□□□□ 0.91
Cux2P70298 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Cux2P70298 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cux2P70298 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cux2P70298 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Gm8798-201ENSMUST00000211877 1661 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Gm14219-201ENSMUST00000120414 288 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC20.73■□□□□ 0.91
Cux2P70298 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Rprl1-201ENSMUST00000158050 327 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC20.73■□□□□ 0.91
Cux2P70298 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC20.73■□□□□ 0.91
Cux2P70298 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Gm37458-201ENSMUST00000194055 410 ntBASIC20.73■□□□□ 0.91
Cux2P70298 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC20.73■□□□□ 0.91
Cux2P70298 Gm19009-201ENSMUST00000223072 823 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cux2P70298 n-R5s211-201ENSMUST00000093689 119 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.73■□□□□ 0.91
Cux2P70298 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cux2P70298 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC20.73■□□□□ 0.91
Cux2P70298 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cux2P70298 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Cux2P70298 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cux2P70298 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Cux2P70298 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC20.72■□□□□ 0.91
Cux2P70298 Gm11354-201ENSMUST00000121974 422 ntBASIC20.72■□□□□ 0.91
Cux2P70298 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC20.72■□□□□ 0.91
Cux2P70298 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC20.72■□□□□ 0.91
Cux2P70298 Gm19640-201ENSMUST00000214849 464 ntBASIC20.72■□□□□ 0.91
Cux2P70298 CT025553.1-201ENSMUST00000226292 299 ntBASIC20.72■□□□□ 0.91
Cux2P70298 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC20.72■□□□□ 0.91
Cux2P70298 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cux2P70298 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cux2P70298 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Gm7278-201ENSMUST00000119836 1401 ntBASIC20.72■□□□□ 0.91
Cux2P70298 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC20.72■□□□□ 0.91
Cux2P70298 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cux2P70298 Gm45342-201ENSMUST00000210903 1363 ntBASIC20.72■□□□□ 0.91
Cux2P70298 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC20.72■□□□□ 0.91
Cux2P70298 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cux2P70298 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cux2P70298 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cux2P70298 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cux2P70298 Gm9361-201ENSMUST00000198695 1507 ntBASIC20.71■□□□□ 0.91
Cux2P70298 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Gm7541-201ENSMUST00000118361 535 ntBASIC20.71■□□□□ 0.91
Cux2P70298 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC20.71■□□□□ 0.91
Cux2P70298 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC20.71■□□□□ 0.91
Cux2P70298 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC20.71■□□□□ 0.91
Cux2P70298 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms