Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Stra8P70278 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Stra8P70278 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.89■□□□□ 0.45
Stra8P70278 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.89■□□□□ 0.45
Stra8P70278 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stra8P70278 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stra8P70278 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Stra8P70278 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stra8P70278 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.88■□□□□ 0.45
Stra8P70278 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Gm43045-201ENSMUST00000198725 2095 ntBASIC17.88■□□□□ 0.45
Stra8P70278 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Stra8P70278 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.88■□□□□ 0.45
Stra8P70278 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.88■□□□□ 0.45
Stra8P70278 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.88■□□□□ 0.45
Stra8P70278 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.88■□□□□ 0.45
Stra8P70278 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Stra8P70278 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.88■□□□□ 0.45
Stra8P70278 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
Stra8P70278 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stra8P70278 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Stra8P70278 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Stra8P70278 Gm8798-201ENSMUST00000211877 1661 ntBASIC17.87■□□□□ 0.45
Stra8P70278 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Stra8P70278 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC17.87■□□□□ 0.45
Stra8P70278 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.87■□□□□ 0.45
Stra8P70278 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Gm5354-201ENSMUST00000182417 973 ntBASIC17.87■□□□□ 0.45
Stra8P70278 Gm28631-201ENSMUST00000190740 334 ntBASIC17.87■□□□□ 0.45
Stra8P70278 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.87■□□□□ 0.45
Stra8P70278 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.87■□□□□ 0.45
Stra8P70278 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Stra8P70278 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC17.86■□□□□ 0.45
Stra8P70278 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC17.86■□□□□ 0.45
Stra8P70278 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.86■□□□□ 0.45
Stra8P70278 Gm12485-201ENSMUST00000119641 291 ntBASIC17.86■□□□□ 0.45
Stra8P70278 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.86■□□□□ 0.45
Stra8P70278 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.86■□□□□ 0.45
Stra8P70278 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Stra8P70278 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.86■□□□□ 0.45
Stra8P70278 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.86■□□□□ 0.45
Stra8P70278 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC17.86■□□□□ 0.45
Stra8P70278 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Stra8P70278 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.86■□□□□ 0.45
Stra8P70278 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Stra8P70278 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Stra8P70278 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Stra8P70278 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Gm20633-201ENSMUST00000176742 2831 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms