Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.13□□□□□ -0.47
Six5P70178 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.13□□□□□ -0.47
Six5P70178 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Six5P70178 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Six5P70178 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.13□□□□□ -0.47
Six5P70178 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.13□□□□□ -0.47
Six5P70178 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.13□□□□□ -0.47
Six5P70178 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Gm22331-201ENSMUST00000158066 136 ntBASIC12.13□□□□□ -0.47
Six5P70178 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Gm27331-201ENSMUST00000183705 60 ntBASIC12.13□□□□□ -0.47
Six5P70178 Gm29649-201ENSMUST00000185649 419 ntBASIC12.13□□□□□ -0.47
Six5P70178 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Gm29705-201ENSMUST00000212598 474 ntBASIC12.13□□□□□ -0.47
Six5P70178 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.13□□□□□ -0.47
Six5P70178 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.13□□□□□ -0.47
Six5P70178 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Six5P70178 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Six5P70178 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Six5P70178 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Six5P70178 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six5P70178 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.12□□□□□ -0.47
Six5P70178 Gm12291-201ENSMUST00000121627 311 ntBASIC12.12□□□□□ -0.47
Six5P70178 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.12□□□□□ -0.47
Six5P70178 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.12□□□□□ -0.47
Six5P70178 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.12□□□□□ -0.47
Six5P70178 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Six5P70178 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six5P70178 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Six5P70178 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Six5P70178 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.11□□□□□ -0.47
Six5P70178 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Six5P70178 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Six5P70178 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.11□□□□□ -0.47
Six5P70178 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Six5P70178 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Six5P70178 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Six5P70178 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms