Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.27□□□□□ -0.12
Hmgb1P63158 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.27□□□□□ -0.12
Hmgb1P63158 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 AC122881.1-201ENSMUST00000225757 2695 ntBASIC14.27□□□□□ -0.12
Hmgb1P63158 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb1P63158 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Gm14350-201ENSMUST00000116642 640 ntBASIC14.27□□□□□ -0.13
Hmgb1P63158 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.27□□□□□ -0.13
Hmgb1P63158 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.27□□□□□ -0.13
Hmgb1P63158 Gm44069-201ENSMUST00000204898 506 ntBASIC14.27□□□□□ -0.13
Hmgb1P63158 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.27□□□□□ -0.13
Hmgb1P63158 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.27□□□□□ -0.13
Hmgb1P63158 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hmgb1P63158 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hmgb1P63158 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.27□□□□□ -0.13
Hmgb1P63158 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb1P63158 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Hmgb1P63158 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hmgb1P63158 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm7488-201ENSMUST00000117148 684 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm12859-201ENSMUST00000117834 427 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm6152-201ENSMUST00000151704 340 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Mir6977-201ENSMUST00000184960 64 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm18473-201ENSMUST00000220543 868 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm15823-201ENSMUST00000064305 670 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.26□□□□□ -0.13
Hmgb1P63158 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmgb1P63158 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb1P63158 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.25□□□□□ -0.13
Hmgb1P63158 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.25□□□□□ -0.13
Hmgb1P63158 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb1P63158 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms