Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.23□□□□□ -0.93
Rpl39P62892 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rpl39P62892 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rpl39P62892 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rpl39P62892 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm6415-201ENSMUST00000118488 348 ntBASIC9.22□□□□□ -0.93
Rpl39P62892 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rpl39P62892 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.22□□□□□ -0.93
Rpl39P62892 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm27772-201ENSMUST00000184900 187 ntBASIC9.22□□□□□ -0.93
Rpl39P62892 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.22□□□□□ -0.93
Rpl39P62892 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.22□□□□□ -0.93
Rpl39P62892 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.22□□□□□ -0.93
Rpl39P62892 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rpl39P62892 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.22□□□□□ -0.93
Rpl39P62892 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rpl39P62892 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.22□□□□□ -0.93
Rpl39P62892 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rpl39P62892 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.21□□□□□ -0.93
Rpl39P62892 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Rpl39P62892 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.21□□□□□ -0.93
Rpl39P62892 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Rpl39P62892 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Rpl39P62892 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rpl39P62892 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Rpl39P62892 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.21□□□□□ -0.93
Rpl39P62892 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.21□□□□□ -0.93
Rpl39P62892 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.21□□□□□ -0.93
Rpl39P62892 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.21□□□□□ -0.93
Rpl39P62892 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rpl39P62892 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
Rpl39P62892 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Rpl39P62892 Gm15240-201ENSMUST00000118156 720 ntBASIC9.21□□□□□ -0.94
Rpl39P62892 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.21□□□□□ -0.94
Rpl39P62892 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.21□□□□□ -0.94
Rpl39P62892 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Rpl39P62892 Gm27533-201ENSMUST00000183800 152 ntBASIC9.21□□□□□ -0.94
Rpl39P62892 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.21□□□□□ -0.94
Rpl39P62892 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.21□□□□□ -0.94
Rpl39P62892 Gm18905-201ENSMUST00000205454 928 ntBASIC9.21□□□□□ -0.94
Rpl39P62892 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rpl39P62892 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Rpl39P62892 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.21□□□□□ -0.94
Rpl39P62892 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Rpl39P62892 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.21□□□□□ -0.94
Rpl39P62892 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.21□□□□□ -0.94
Rpl39P62892 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rpl39P62892 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms