Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.77□□□□□ -0.53
Lsm3P62311 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.77□□□□□ -0.53
Lsm3P62311 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Lsm3P62311 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Cog3-203ENSMUST00000227473 4197 ntBASIC11.77□□□□□ -0.53
Lsm3P62311 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm3P62311 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm3P62311 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Lsm3P62311 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lsm3P62311 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.76□□□□□ -0.53
Lsm3P62311 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Lsm3P62311 Gm2810-201ENSMUST00000118681 990 ntBASIC11.76□□□□□ -0.53
Lsm3P62311 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.76□□□□□ -0.53
Lsm3P62311 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.76□□□□□ -0.53
Lsm3P62311 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.76□□□□□ -0.53
Lsm3P62311 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lsm3P62311 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.76□□□□□ -0.53
Lsm3P62311 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.76□□□□□ -0.53
Lsm3P62311 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Map1b-203ENSMUST00000223725 2669 ntBASIC11.76□□□□□ -0.53
Lsm3P62311 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.76□□□□□ -0.53
Lsm3P62311 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Lsm3P62311 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lsm3P62311 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Lsm3P62311 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm3P62311 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.75□□□□□ -0.53
Lsm3P62311 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.75□□□□□ -0.53
Lsm3P62311 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.75□□□□□ -0.53
Lsm3P62311 Gm18737-201ENSMUST00000173594 937 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Mir5131-201ENSMUST00000175426 93 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Mir5126-201ENSMUST00000175513 77 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms