Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lrch1P62046 Gm14999-201ENSMUST00000121039 624 ntBASIC15.2■□□□□ 0.02
Lrch1P62046 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.2■□□□□ 0.02
Lrch1P62046 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.2■□□□□ 0.02
Lrch1P62046 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Lrch1P62046 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.2■□□□□ 0.02
Lrch1P62046 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.2■□□□□ 0.02
Lrch1P62046 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lrch1P62046 AY036118-201ENSMUST00000200021 923 ntBASIC15.2■□□□□ 0.02
Lrch1P62046 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.2■□□□□ 0.02
Lrch1P62046 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.2■□□□□ 0.02
Lrch1P62046 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lrch1P62046 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.2■□□□□ 0.02
Lrch1P62046 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.2■□□□□ 0.02
Lrch1P62046 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.2■□□□□ 0.02
Lrch1P62046 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrch1P62046 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Lrch1P62046 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.19■□□□□ 0.02
Lrch1P62046 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.19■□□□□ 0.02
Lrch1P62046 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.19■□□□□ 0.02
Lrch1P62046 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.19■□□□□ 0.02
Lrch1P62046 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.19■□□□□ 0.02
Lrch1P62046 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lrch1P62046 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrch1P62046 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lrch1P62046 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.18■□□□□ 0.02
Lrch1P62046 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.18■□□□□ 0.02
Lrch1P62046 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Lrch1P62046 Gm12165-201ENSMUST00000117047 342 ntBASIC15.18■□□□□ 0.02
Lrch1P62046 Gm15711-201ENSMUST00000118889 535 ntBASIC15.18■□□□□ 0.02
Lrch1P62046 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Gm12291-201ENSMUST00000121627 311 ntBASIC15.18■□□□□ 0.02
Lrch1P62046 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.18■□□□□ 0.02
Lrch1P62046 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Lrch1P62046 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lrch1P62046 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.18■□□□□ 0.02
Lrch1P62046 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms