Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cks1bP61025 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cks1bP61025 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.26□□□□□ -0.93
Cks1bP61025 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1bP61025 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cks1bP61025 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Cks1bP61025 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Cks1bP61025 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.25□□□□□ -0.93
Cks1bP61025 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.25□□□□□ -0.93
Cks1bP61025 Gm6222-201ENSMUST00000120787 396 ntBASIC9.25□□□□□ -0.93
Cks1bP61025 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.25□□□□□ -0.93
Cks1bP61025 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Gm17968-201ENSMUST00000194902 784 ntBASIC9.25□□□□□ -0.93
Cks1bP61025 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.25□□□□□ -0.93
Cks1bP61025 Gm18027-201ENSMUST00000218947 619 ntBASIC9.25□□□□□ -0.93
Cks1bP61025 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.25□□□□□ -0.93
Cks1bP61025 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Cks1bP61025 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cks1bP61025 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.25□□□□□ -0.93
Cks1bP61025 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cks1bP61025 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1bP61025 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cks1bP61025 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.24□□□□□ -0.93
Cks1bP61025 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.24□□□□□ -0.93
Cks1bP61025 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.24□□□□□ -0.93
Cks1bP61025 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.24□□□□□ -0.93
Cks1bP61025 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.24□□□□□ -0.93
Cks1bP61025 Gm13823-201ENSMUST00000119930 345 ntBASIC9.24□□□□□ -0.93
Cks1bP61025 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1bP61025 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms