Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.24□□□□□ -0.45
Nup43P59235 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.24□□□□□ -0.45
Nup43P59235 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.24□□□□□ -0.45
Nup43P59235 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.23□□□□□ -0.45
Nup43P59235 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nup43P59235 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nup43P59235 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.23□□□□□ -0.45
Nup43P59235 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nup43P59235 Gm11425-201ENSMUST00000119608 498 ntBASIC12.23□□□□□ -0.45
Nup43P59235 Gm1335-201ENSMUST00000121653 386 ntBASIC12.23□□□□□ -0.45
Nup43P59235 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nup43P59235 Gm27731-201ENSMUST00000185192 107 ntBASIC12.23□□□□□ -0.45
Nup43P59235 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.23□□□□□ -0.45
Nup43P59235 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.23□□□□□ -0.45
Nup43P59235 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nup43P59235 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Gm9396-201ENSMUST00000076703 567 ntBASIC12.23□□□□□ -0.45
Nup43P59235 Gm10268-201ENSMUST00000085340 555 ntBASIC12.23□□□□□ -0.45
Nup43P59235 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.23□□□□□ -0.45
Nup43P59235 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup43P59235 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Nup43P59235 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nup43P59235 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup43P59235 Gm12384-201ENSMUST00000119228 919 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup43P59235 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup43P59235 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Gm17208-201ENSMUST00000168388 535 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Gm7029-201ENSMUST00000173226 450 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup43P59235 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup43P59235 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup43P59235 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup43P59235 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup43P59235 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.22□□□□□ -0.45
Nup43P59235 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nup43P59235 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms