Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.23□□□□□ -0.29
Tubgcp3P58854 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm11918-201ENSMUST00000121660 179 ntBASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm38671-201ENSMUST00000200573 130 ntBASIC13.23□□□□□ -0.29
Tubgcp3P58854 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubgcp3P58854 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.22□□□□□ -0.29
Tubgcp3P58854 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Gm7287-201ENSMUST00000205267 602 ntBASIC13.22□□□□□ -0.29
Tubgcp3P58854 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubgcp3P58854 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.21□□□□□ -0.29
Tubgcp3P58854 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Gm13612-201ENSMUST00000119276 390 ntBASIC13.21□□□□□ -0.29
Tubgcp3P58854 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Gm6458-201ENSMUST00000211573 635 ntBASIC13.21□□□□□ -0.29
Tubgcp3P58854 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubgcp3P58854 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tubgcp3P58854 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.21□□□□□ -0.3
Tubgcp3P58854 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Tubgcp3P58854 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tubgcp3P58854 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tubgcp3P58854 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms