Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lim2P56563 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.96□□□□□ -0.34
Lim2P56563 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lim2P56563 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.95□□□□□ -0.34
Lim2P56563 Gm1335-201ENSMUST00000121653 386 ntBASIC12.95□□□□□ -0.34
Lim2P56563 Gm2231-201ENSMUST00000125661 612 ntBASIC12.95□□□□□ -0.34
Lim2P56563 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.95□□□□□ -0.34
Lim2P56563 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Gm27682-201ENSMUST00000183930 110 ntBASIC12.95□□□□□ -0.34
Lim2P56563 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.95□□□□□ -0.34
Lim2P56563 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.95□□□□□ -0.34
Lim2P56563 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.95□□□□□ -0.34
Lim2P56563 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.95□□□□□ -0.34
Lim2P56563 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lim2P56563 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lim2P56563 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Lim2P56563 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Lim2P56563 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.94□□□□□ -0.34
Lim2P56563 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.94□□□□□ -0.34
Lim2P56563 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.94□□□□□ -0.34
Lim2P56563 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.94□□□□□ -0.34
Lim2P56563 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Gm16479-201ENSMUST00000121706 932 ntBASIC12.94□□□□□ -0.34
Lim2P56563 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 AY702102-202ENSMUST00000194651 1173 ntBASIC12.94□□□□□ -0.34
Lim2P56563 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Lim2P56563 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.94□□□□□ -0.34
Lim2P56563 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.94□□□□□ -0.34
Lim2P56563 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.94□□□□□ -0.34
Lim2P56563 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.94□□□□□ -0.34
Lim2P56563 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lim2P56563 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lim2P56563 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.94□□□□□ -0.34
Lim2P56563 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms