Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abcd3P55096 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Abcd3P55096 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abcd3P55096 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abcd3P55096 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abcd3P55096 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Abcd3P55096 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.59□□□□□ -0.55
Abcd3P55096 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Gm8213-201ENSMUST00000118191 441 ntBASIC11.59□□□□□ -0.55
Abcd3P55096 Gm10156-201ENSMUST00000122364 462 ntBASIC11.59□□□□□ -0.55
Abcd3P55096 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.59□□□□□ -0.55
Abcd3P55096 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.59□□□□□ -0.55
Abcd3P55096 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Abcd3P55096 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Abcd3P55096 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Abcd3P55096 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abcd3P55096 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.59□□□□□ -0.55
Abcd3P55096 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Abcd3P55096 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Abcd3P55096 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Abcd3P55096 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Abcd3P55096 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Abcd3P55096 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Abcd3P55096 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.58□□□□□ -0.56
Abcd3P55096 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Gm13123-201ENSMUST00000122173 492 ntBASIC11.58□□□□□ -0.56
Abcd3P55096 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.58□□□□□ -0.56
Abcd3P55096 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.58□□□□□ -0.56
Abcd3P55096 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.58□□□□□ -0.56
Abcd3P55096 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.58□□□□□ -0.56
Abcd3P55096 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Abcd3P55096 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.58□□□□□ -0.56
Abcd3P55096 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Abcd3P55096 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.57□□□□□ -0.56
Abcd3P55096 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.57□□□□□ -0.56
Abcd3P55096 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.57□□□□□ -0.56
Abcd3P55096 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.57□□□□□ -0.56
Abcd3P55096 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Abcd3P55096 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Abcd3P55096 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.57□□□□□ -0.56
Abcd3P55096 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Abcd3P55096 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms