Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Gm14263-201ENSMUST00000117955 746 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Gm25261-201ENSMUST00000157416 134 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Gm2991-201ENSMUST00000173338 480 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Gm20482-202ENSMUST00000174729 825 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Gm6621-201ENSMUST00000193251 772 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Gm29787-201ENSMUST00000222129 849 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox3P53784 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Sox3P53784 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox3P53784 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm8927-201ENSMUST00000181978 981 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox3P53784 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm10608-202ENSMUST00000213924 676 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Gm18027-201ENSMUST00000218947 619 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox3P53784 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sox3P53784 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.42□□□□□ -0.42
Sox3P53784 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sox3P53784 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox3P53784 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms