Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.24□□□□□ -0.29
ClgnP52194 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Gm18473-201ENSMUST00000220543 868 ntBASIC13.24□□□□□ -0.29
ClgnP52194 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.24□□□□□ -0.29
ClgnP52194 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.24□□□□□ -0.29
ClgnP52194 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
ClgnP52194 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClgnP52194 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.23□□□□□ -0.29
ClgnP52194 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.23□□□□□ -0.29
ClgnP52194 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.23□□□□□ -0.29
ClgnP52194 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.23□□□□□ -0.29
ClgnP52194 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClgnP52194 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClgnP52194 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClgnP52194 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ClgnP52194 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ClgnP52194 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ClgnP52194 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ClgnP52194 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ClgnP52194 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.22□□□□□ -0.29
ClgnP52194 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Itm2b-204ENSMUST00000228637 783 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms