Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RoraP51448 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RoraP51448 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.27□□□□□ -0.44
RoraP51448 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RoraP51448 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RoraP51448 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RoraP51448 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.27□□□□□ -0.44
RoraP51448 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RoraP51448 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RoraP51448 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Gm26185-201ENSMUST00000157692 266 ntBASIC12.27□□□□□ -0.45
RoraP51448 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.27□□□□□ -0.45
RoraP51448 Gm27516-201ENSMUST00000184237 98 ntBASIC12.27□□□□□ -0.45
RoraP51448 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.27□□□□□ -0.45
RoraP51448 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RoraP51448 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RoraP51448 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.26□□□□□ -0.45
RoraP51448 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RoraP51448 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.26□□□□□ -0.45
RoraP51448 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RoraP51448 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.26□□□□□ -0.45
RoraP51448 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.26□□□□□ -0.45
RoraP51448 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.26□□□□□ -0.45
RoraP51448 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Olfr284-202ENSMUST00000206647 966 ntBASIC12.26□□□□□ -0.45
RoraP51448 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.26□□□□□ -0.45
RoraP51448 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.26□□□□□ -0.45
RoraP51448 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RoraP51448 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.26□□□□□ -0.45
RoraP51448 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RoraP51448 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.25□□□□□ -0.45
RoraP51448 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RoraP51448 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.25□□□□□ -0.45
RoraP51448 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RoraP51448 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.25□□□□□ -0.45
RoraP51448 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.25□□□□□ -0.45
RoraP51448 Gm13786-201ENSMUST00000122371 333 ntBASIC12.25□□□□□ -0.45
RoraP51448 Gm7809-201ENSMUST00000153199 742 ntBASIC12.25□□□□□ -0.45
RoraP51448 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RoraP51448 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.25□□□□□ -0.45
RoraP51448 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.25□□□□□ -0.45
RoraP51448 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms