Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Brca1P48754 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Brca1P48754 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Gm25881-201ENSMUST00000157783 103 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Gm28071-201ENSMUST00000190355 478 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Gm5455-201ENSMUST00000058710 715 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Brca1P48754 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.25□□□□□ -0.13
Brca1P48754 Gm34023-201ENSMUST00000195539 217 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Gm4482-201ENSMUST00000200876 742 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Gm44980-201ENSMUST00000205826 314 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.25□□□□□ -0.13
Brca1P48754 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.25□□□□□ -0.13
Brca1P48754 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brca1P48754 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Brca1P48754 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.25□□□□□ -0.13
Brca1P48754 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.24□□□□□ -0.13
Brca1P48754 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Brca1P48754 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Brca1P48754 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.24□□□□□ -0.13
Brca1P48754 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.24□□□□□ -0.13
Brca1P48754 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Mir1901-201ENSMUST00000122616 78 ntBASIC14.24□□□□□ -0.13
Brca1P48754 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Mir7076-201ENSMUST00000183519 74 ntBASIC14.24□□□□□ -0.13
Brca1P48754 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.24□□□□□ -0.13
Brca1P48754 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Brca1P48754 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Brca1P48754 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Brca1P48754 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brca1P48754 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.23□□□□□ -0.13
Brca1P48754 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Brca1P48754 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.23□□□□□ -0.13
Brca1P48754 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.23□□□□□ -0.13
Brca1P48754 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Brca1P48754 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Brca1P48754 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms