Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.45□□□□□ -0.42
Prox1P48437 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Prox1P48437 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.45□□□□□ -0.42
Prox1P48437 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Prox1P48437 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Gm43703-201ENSMUST00000200523 763 ntBASIC12.45□□□□□ -0.42
Prox1P48437 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Gm6888-201ENSMUST00000221983 706 ntBASIC12.45□□□□□ -0.42
Prox1P48437 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.45□□□□□ -0.42
Prox1P48437 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.45□□□□□ -0.42
Prox1P48437 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Prox1P48437 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Prox1P48437 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.44□□□□□ -0.42
Prox1P48437 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.44□□□□□ -0.42
Prox1P48437 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Prox1P48437 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.44□□□□□ -0.42
Prox1P48437 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Prox1P48437 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gm15240-201ENSMUST00000118156 720 ntBASIC12.44□□□□□ -0.42
Prox1P48437 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.44□□□□□ -0.42
Prox1P48437 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.44□□□□□ -0.42
Prox1P48437 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.44□□□□□ -0.42
Prox1P48437 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Prox1P48437 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.44□□□□□ -0.42
Prox1P48437 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Prox1P48437 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Prox1P48437 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.44□□□□□ -0.42
Prox1P48437 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Prox1P48437 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.44□□□□□ -0.42
Prox1P48437 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.44□□□□□ -0.42
Prox1P48437 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Prox1P48437 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prox1P48437 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.43□□□□□ -0.42
Prox1P48437 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prox1P48437 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prox1P48437 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.43□□□□□ -0.42
Prox1P48437 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prox1P48437 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prox1P48437 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms