Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm4768-201ENSMUST00000206199 686 ntBASIC11.87□□□□□ -0.51
Nkx2-2P42586 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Mir339-201ENSMUST00000083659 96 ntBASIC11.87□□□□□ -0.51
Nkx2-2P42586 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-2P42586 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.86□□□□□ -0.51
Nkx2-2P42586 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.86□□□□□ -0.51
Nkx2-2P42586 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Snord83b-201ENSMUST00000104546 94 ntBASIC11.86□□□□□ -0.51
Nkx2-2P42586 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm16177-201ENSMUST00000120728 718 ntBASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm8602-201ENSMUST00000184045 607 ntBASIC11.86□□□□□ -0.51
Nkx2-2P42586 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.86□□□□□ -0.51
Nkx2-2P42586 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-2P42586 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm4984-201ENSMUST00000115987 360 ntBASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm12363-201ENSMUST00000122250 668 ntBASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm23363-201ENSMUST00000175024 79 ntBASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm19163-201ENSMUST00000223313 780 ntBASIC11.85□□□□□ -0.51
Nkx2-2P42586 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms