Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Gm44397-201ENSMUST00000195950 113 ntBASIC12.56□□□□□ -0.4
TfamP40630 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Gm6983-201ENSMUST00000214912 628 ntBASIC12.56□□□□□ -0.4
TfamP40630 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.56□□□□□ -0.4
TfamP40630 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.56□□□□□ -0.4
TfamP40630 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TfamP40630 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TfamP40630 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TfamP40630 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TfamP40630 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
TfamP40630 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.55□□□□□ -0.4
TfamP40630 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.55□□□□□ -0.4
TfamP40630 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.55□□□□□ -0.4
TfamP40630 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TfamP40630 Mir7654-201ENSMUST00000185082 70 ntBASIC12.55□□□□□ -0.4
TfamP40630 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TfamP40630 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.55□□□□□ -0.4
TfamP40630 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TfamP40630 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TfamP40630 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Mir6392-201ENSMUST00000184924 108 ntBASIC12.54□□□□□ -0.4
TfamP40630 Gm37917-201ENSMUST00000194711 392 ntBASIC12.54□□□□□ -0.4
TfamP40630 Gm18624-201ENSMUST00000220966 658 ntBASIC12.54□□□□□ -0.4
TfamP40630 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.54□□□□□ -0.4
TfamP40630 Itm2b-204ENSMUST00000228637 783 ntBASIC12.54□□□□□ -0.4
TfamP40630 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TfamP40630 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TfamP40630 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.54□□□□□ -0.4
TfamP40630 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TfamP40630 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TfamP40630 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms