Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm17391-201ENSMUST00000171036 126 ntBASIC13.26□□□□□ -0.29
Cxcl12P40224 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.26□□□□□ -0.29
Cxcl12P40224 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cxcl12P40224 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cxcl12P40224 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Gm15515-201ENSMUST00000117827 822 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Gm12291-201ENSMUST00000121627 311 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl12P40224 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.25□□□□□ -0.29
Cxcl12P40224 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.25□□□□□ -0.29
Cxcl12P40224 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.25□□□□□ -0.29
Cxcl12P40224 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Cxcl12P40224 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cxcl12P40224 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.25□□□□□ -0.29
Cxcl12P40224 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl12P40224 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm14644-201ENSMUST00000116671 647 ntBASIC13.24□□□□□ -0.29
Cxcl12P40224 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm13035-201ENSMUST00000117496 342 ntBASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm12795-201ENSMUST00000117594 539 ntBASIC13.24□□□□□ -0.29
Cxcl12P40224 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm1821-202ENSMUST00000227415 750 ntBASIC13.24□□□□□ -0.29
Cxcl12P40224 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms