Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 Gm17070-201ENSMUST00000170463 784 ntBASIC18.95■□□□□ 0.62
Chd1P40201 Gm4310-201ENSMUST00000177847 889 ntBASIC18.95■□□□□ 0.62
Chd1P40201 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Chd1P40201 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1P40201 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chd1P40201 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC18.94■□□□□ 0.62
Chd1P40201 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC18.94■□□□□ 0.62
Chd1P40201 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd1P40201 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chd1P40201 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chd1P40201 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chd1P40201 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Chd1P40201 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd1P40201 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.94■□□□□ 0.62
Chd1P40201 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd1P40201 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd1P40201 Gm38117-201ENSMUST00000194653 939 ntBASIC18.94■□□□□ 0.62
Chd1P40201 Gm3726-201ENSMUST00000203110 785 ntBASIC18.94■□□□□ 0.62
Chd1P40201 Gm44953-201ENSMUST00000208745 1286 ntBASIC18.94■□□□□ 0.62
Chd1P40201 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1P40201 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Chd1P40201 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chd1P40201 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Gm10152-201ENSMUST00000193475 1344 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Gm25766-201ENSMUST00000104101 131 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Gm14942-201ENSMUST00000119642 336 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Gm24398-201ENSMUST00000157870 109 ntBASIC18.93■□□□□ 0.62
Chd1P40201 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 AC129308.3-201ENSMUST00000225652 524 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chd1P40201 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Gm16380-201ENSMUST00000077997 478 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Gm5451-201ENSMUST00000080545 579 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Gm23680-201ENSMUST00000083162 164 ntBASIC18.93■□□□□ 0.62
Chd1P40201 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chd1P40201 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chd1P40201 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Chd1P40201 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1P40201 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Gm14807-201ENSMUST00000116640 983 ntBASIC18.92■□□□□ 0.62
Chd1P40201 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Chd1P40201 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC18.92■□□□□ 0.62
Chd1P40201 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd1P40201 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms