Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col18a1P39061 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col18a1P39061 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC16.71■□□□□ 0.27
Col18a1P39061 Gm14942-201ENSMUST00000119642 336 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 Gm12783-201ENSMUST00000121425 397 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC16.71■□□□□ 0.27
Col18a1P39061 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col18a1P39061 Mir6407-201ENSMUST00000184510 101 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 CT030653.1-201ENSMUST00000224382 1279 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 AC112945.1-201ENSMUST00000226413 514 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col18a1P39061 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.71■□□□□ 0.27
Col18a1P39061 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.71■□□□□ 0.27
Col18a1P39061 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col18a1P39061 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col18a1P39061 Gm42941-201ENSMUST00000200347 1321 ntBASIC16.71■□□□□ 0.26
Col18a1P39061 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
Col18a1P39061 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col18a1P39061 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Col18a1P39061 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col18a1P39061 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Col18a1P39061 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col18a1P39061 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col18a1P39061 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col18a1P39061 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC16.7■□□□□ 0.26
Col18a1P39061 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.7■□□□□ 0.26
Col18a1P39061 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.7■□□□□ 0.26
Col18a1P39061 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col18a1P39061 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm4310-201ENSMUST00000177847 889 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm4604-201ENSMUST00000025040 390 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm17213-201ENSMUST00000165161 1360 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col18a1P39061 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col18a1P39061 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Col18a1P39061 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Gm11979-201ENSMUST00000119629 743 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Gm45856-201ENSMUST00000212752 416 ntBASIC16.69■□□□□ 0.26
Col18a1P39061 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Col18a1P39061 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col18a1P39061 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Col18a1P39061 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col18a1P39061 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col18a1P39061 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col18a1P39061 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
Col18a1P39061 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col18a1P39061 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.68■□□□□ 0.26
Col18a1P39061 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col18a1P39061 Gm45410-201ENSMUST00000211331 1093 ntBASIC16.68■□□□□ 0.26
Col18a1P39061 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC16.68■□□□□ 0.26
Col18a1P39061 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col18a1P39061 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.68■□□□□ 0.26
Col18a1P39061 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms