Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HmgclP38060 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HmgclP38060 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.76□□□□□ -0.37
HmgclP38060 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.76□□□□□ -0.37
HmgclP38060 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.76□□□□□ -0.37
HmgclP38060 Gm17208-201ENSMUST00000168388 535 ntBASIC12.76□□□□□ -0.37
HmgclP38060 Gm22121-201ENSMUST00000175148 54 ntBASIC12.76□□□□□ -0.37
HmgclP38060 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.76□□□□□ -0.37
HmgclP38060 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.76□□□□□ -0.37
HmgclP38060 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.76□□□□□ -0.37
HmgclP38060 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HmgclP38060 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.76□□□□□ -0.37
HmgclP38060 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.76□□□□□ -0.37
HmgclP38060 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HmgclP38060 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HmgclP38060 Gm12390-201ENSMUST00000117897 397 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm14921-201ENSMUST00000118643 908 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm14704-201ENSMUST00000120300 874 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm16177-201ENSMUST00000120728 718 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.75□□□□□ -0.37
HmgclP38060 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Gm26927-201ENSMUST00000182385 965 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm5745-201ENSMUST00000183748 313 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm8602-201ENSMUST00000184045 607 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HmgclP38060 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.75□□□□□ -0.37
HmgclP38060 Gm8099-201ENSMUST00000200510 742 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Gm4768-201ENSMUST00000206199 686 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
HmgclP38060 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HmgclP38060 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HmgclP38060 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.75□□□□□ -0.37
HmgclP38060 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.75□□□□□ -0.37
HmgclP38060 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HmgclP38060 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms