Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LdlrP35951 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.91□□□□□ -0.34
LdlrP35951 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.9□□□□□ -0.34
LdlrP35951 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LdlrP35951 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.9□□□□□ -0.34
LdlrP35951 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.9□□□□□ -0.34
LdlrP35951 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.9□□□□□ -0.34
LdlrP35951 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.9□□□□□ -0.34
LdlrP35951 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LdlrP35951 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LdlrP35951 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.89□□□□□ -0.35
LdlrP35951 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Gm12485-201ENSMUST00000119641 291 ntBASIC12.89□□□□□ -0.35
LdlrP35951 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.89□□□□□ -0.35
LdlrP35951 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.89□□□□□ -0.35
LdlrP35951 Gm45331-201ENSMUST00000209868 554 ntBASIC12.89□□□□□ -0.35
LdlrP35951 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LdlrP35951 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LdlrP35951 Gm5356-201ENSMUST00000093326 615 ntBASIC12.89□□□□□ -0.35
LdlrP35951 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LdlrP35951 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gm12390-201ENSMUST00000117897 397 ntBASIC12.88□□□□□ -0.35
LdlrP35951 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gm29608-201ENSMUST00000190444 463 ntBASIC12.88□□□□□ -0.35
LdlrP35951 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LdlrP35951 Gm5279-201ENSMUST00000199575 745 ntBASIC12.88□□□□□ -0.35
LdlrP35951 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LdlrP35951 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.88□□□□□ -0.35
LdlrP35951 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms