Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rfc1P35601 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfc1P35601 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfc1P35601 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfc1P35601 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfc1P35601 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.65□□□□□ -0.22
Rfc1P35601 Gm15653-201ENSMUST00000119247 907 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfc1P35601 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Gm25144-201ENSMUST00000179561 110 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Gm25352-201ENSMUST00000179815 110 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Gm8927-201ENSMUST00000181978 981 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.65□□□□□ -0.22
Rfc1P35601 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfc1P35601 Gm33320-201ENSMUST00000192232 530 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rfc1P35601 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.65□□□□□ -0.22
Rfc1P35601 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Gm3222-201ENSMUST00000071282 990 ntBASIC13.65□□□□□ -0.22
Rfc1P35601 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc1P35601 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rfc1P35601 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Rfc1P35601 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfc1P35601 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.64□□□□□ -0.23
Rfc1P35601 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rfc1P35601 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rfc1P35601 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Rfc1P35601 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfc1P35601 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rfc1P35601 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rfc1P35601 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.64□□□□□ -0.23
Rfc1P35601 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rfc1P35601 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfc1P35601 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Rfc1P35601 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc1P35601 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.63□□□□□ -0.23
Rfc1P35601 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms