Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thbs1P35441 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thbs1P35441 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.01□□□□□ -0.49
Thbs1P35441 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thbs1P35441 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.01□□□□□ -0.49
Thbs1P35441 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Thbs1P35441 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.01□□□□□ -0.49
Thbs1P35441 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thbs1P35441 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.01□□□□□ -0.49
Thbs1P35441 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.01□□□□□ -0.49
Thbs1P35441 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs1P35441 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Gm38385-201ENSMUST00000194454 2351 ntBASIC12□□□□□ -0.49
Thbs1P35441 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12□□□□□ -0.49
Thbs1P35441 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
Thbs1P35441 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
Thbs1P35441 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12□□□□□ -0.49
Thbs1P35441 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Gm13612-201ENSMUST00000119276 390 ntBASIC12□□□□□ -0.49
Thbs1P35441 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12□□□□□ -0.49
Thbs1P35441 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12□□□□□ -0.49
Thbs1P35441 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Gm28911-201ENSMUST00000188837 117 ntBASIC12□□□□□ -0.49
Thbs1P35441 Gm28693-202ENSMUST00000190758 331 ntBASIC12□□□□□ -0.49
Thbs1P35441 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12□□□□□ -0.49
Thbs1P35441 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Gm38049-201ENSMUST00000195698 1372 ntBASIC12□□□□□ -0.49
Thbs1P35441 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12□□□□□ -0.49
Thbs1P35441 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms