Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc11P31313 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc11P31313 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm42627-201ENSMUST00000197347 224 ntBASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.57□□□□□ -0.4
Hoxc11P31313 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxc11P31313 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm9823-201ENSMUST00000051212 327 ntBASIC12.57□□□□□ -0.4
Hoxc11P31313 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc11P31313 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc11P31313 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc11P31313 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc11P31313 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm11637-201ENSMUST00000120601 592 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm16379-201ENSMUST00000161469 348 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.56□□□□□ -0.4
Hoxc11P31313 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm8762-201ENSMUST00000193486 339 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc11P31313 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc11P31313 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc11P31313 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc11P31313 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.56□□□□□ -0.4
Hoxc11P31313 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Gm43133-201ENSMUST00000197472 463 ntBASIC12.55□□□□□ -0.4
Hoxc11P31313 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.55□□□□□ -0.4
Hoxc11P31313 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.55□□□□□ -0.4
Hoxc11P31313 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms