Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm14999-201ENSMUST00000121039 624 ntBASIC14.82□□□□□ -0.04
Vcam1P29533 Gm14832-201ENSMUST00000121289 322 ntBASIC14.82□□□□□ -0.04
Vcam1P29533 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.82□□□□□ -0.04
Vcam1P29533 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.82□□□□□ -0.04
Vcam1P29533 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vcam1P29533 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.82□□□□□ -0.04
Vcam1P29533 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.82□□□□□ -0.04
Vcam1P29533 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.82□□□□□ -0.04
Vcam1P29533 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vcam1P29533 Gm14130-201ENSMUST00000118417 987 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Gm11439-201ENSMUST00000118598 409 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Gm11597-201ENSMUST00000121423 964 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Mir5132-201ENSMUST00000175166 71 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Gm25700-201ENSMUST00000177693 110 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vcam1P29533 Gm27341-201ENSMUST00000183570 106 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.81□□□□□ -0.04
Vcam1P29533 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Vcam1P29533 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vcam1P29533 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vcam1P29533 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcam1P29533 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vcam1P29533 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Vcam1P29533 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Vcam1P29533 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.8□□□□□ -0.04
Vcam1P29533 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vcam1P29533 Rps4l-202ENSMUST00000204242 789 ntBASIC14.8□□□□□ -0.04
Vcam1P29533 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Vcam1P29533 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Vcam1P29533 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vcam1P29533 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Vcam1P29533 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Vcam1P29533 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.8□□□□□ -0.04
Vcam1P29533 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vcam1P29533 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcam1P29533 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms