Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpl3P27659 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.28□□□□□ -0.44
Rpl3P27659 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.28□□□□□ -0.44
Rpl3P27659 Gm27701-201ENSMUST00000184498 110 ntBASIC12.28□□□□□ -0.44
Rpl3P27659 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpl3P27659 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.28□□□□□ -0.44
Rpl3P27659 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpl3P27659 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.28□□□□□ -0.44
Rpl3P27659 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpl3P27659 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl3P27659 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rpl3P27659 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rpl3P27659 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rpl3P27659 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl3P27659 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rpl3P27659 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl3P27659 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.27□□□□□ -0.45
Rpl3P27659 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpl3P27659 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rpl3P27659 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpl3P27659 Gm2495-201ENSMUST00000191160 466 ntBASIC12.27□□□□□ -0.45
Rpl3P27659 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpl3P27659 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.27□□□□□ -0.45
Rpl3P27659 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rpl3P27659 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rpl3P27659 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.27□□□□□ -0.45
Rpl3P27659 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rpl3P27659 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.27□□□□□ -0.45
Rpl3P27659 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl3P27659 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl3P27659 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpl3P27659 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpl3P27659 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rpl3P27659 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.26□□□□□ -0.45
Rpl3P27659 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.26□□□□□ -0.45
Rpl3P27659 Auts2-212ENSMUST00000178555 309 ntBASIC12.26□□□□□ -0.45
Rpl3P27659 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Gm18018-201ENSMUST00000198273 408 ntBASIC12.26□□□□□ -0.45
Rpl3P27659 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl3P27659 Gm2423-201ENSMUST00000074863 733 ntBASIC12.26□□□□□ -0.45
Rpl3P27659 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms