Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc6P10629 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc6P10629 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Rprl1-202ENSMUST00000198476 238 ntBASIC14.31□□□□□ -0.12
Hoxc6P10629 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.31□□□□□ -0.12
Hoxc6P10629 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.31□□□□□ -0.12
Hoxc6P10629 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc6P10629 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.31□□□□□ -0.12
Hoxc6P10629 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.31□□□□□ -0.12
Hoxc6P10629 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc6P10629 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.3□□□□□ -0.12
Hoxc6P10629 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Gm13296-201ENSMUST00000117854 997 ntBASIC14.3□□□□□ -0.12
Hoxc6P10629 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Hoxc6P10629 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.3□□□□□ -0.12
Hoxc6P10629 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Gm10312-201ENSMUST00000078515 489 ntBASIC14.3□□□□□ -0.12
Hoxc6P10629 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc6P10629 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc6P10629 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.29□□□□□ -0.12
Hoxc6P10629 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc6P10629 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc6P10629 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms