Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm16202-201ENSMUST00000117532 544 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm14127-201ENSMUST00000117906 678 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm11803-201ENSMUST00000119966 444 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp6P0C0A3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Proscos-202ENSMUST00000178990 666 ntBASIC14.11□□□□□ -0.15
Chmp6P0C0A3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.11□□□□□ -0.15
Chmp6P0C0A3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Gm6091-201ENSMUST00000098307 165 ntBASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chmp6P0C0A3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms