Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TnfP06804 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
TnfP06804 Mir339-201ENSMUST00000083659 96 ntBASIC13.73□□□□□ -0.21
TnfP06804 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
TnfP06804 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.72□□□□□ -0.21
TnfP06804 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.72□□□□□ -0.21
TnfP06804 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TnfP06804 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TnfP06804 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.72□□□□□ -0.21
TnfP06804 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TnfP06804 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.72□□□□□ -0.21
TnfP06804 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.72□□□□□ -0.21
TnfP06804 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TnfP06804 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.72□□□□□ -0.21
TnfP06804 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TnfP06804 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TnfP06804 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TnfP06804 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TnfP06804 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.71□□□□□ -0.21
TnfP06804 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.71□□□□□ -0.21
TnfP06804 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.71□□□□□ -0.21
TnfP06804 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.71□□□□□ -0.21
TnfP06804 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.71□□□□□ -0.21
TnfP06804 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.71□□□□□ -0.21
TnfP06804 Gm9257-201ENSMUST00000221254 232 ntBASIC13.71□□□□□ -0.21
TnfP06804 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Gm24526-201ENSMUST00000082921 158 ntBASIC13.71□□□□□ -0.21
TnfP06804 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TnfP06804 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TnfP06804 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TnfP06804 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TnfP06804 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TnfP06804 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TnfP06804 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TnfP06804 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TnfP06804 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TnfP06804 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TnfP06804 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.7□□□□□ -0.22
TnfP06804 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
TnfP06804 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.7□□□□□ -0.22
TnfP06804 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms