Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PrnpP04925 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
PrnpP04925 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
PrnpP04925 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrnpP04925 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.38□□□□□ -0.27
PrnpP04925 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
PrnpP04925 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
PrnpP04925 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PrnpP04925 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.37□□□□□ -0.27
PrnpP04925 Gm12566-201ENSMUST00000121479 359 ntBASIC13.37□□□□□ -0.27
PrnpP04925 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.37□□□□□ -0.27
PrnpP04925 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.37□□□□□ -0.27
PrnpP04925 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
PrnpP04925 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.37□□□□□ -0.27
PrnpP04925 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PrnpP04925 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.37□□□□□ -0.27
PrnpP04925 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrnpP04925 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PrnpP04925 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PrnpP04925 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PrnpP04925 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PrnpP04925 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.36□□□□□ -0.27
PrnpP04925 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.36□□□□□ -0.27
PrnpP04925 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PrnpP04925 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.36□□□□□ -0.27
PrnpP04925 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
PrnpP04925 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.36□□□□□ -0.27
PrnpP04925 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm16296-201ENSMUST00000159905 325 ntBASIC13.36□□□□□ -0.27
PrnpP04925 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.36□□□□□ -0.27
PrnpP04925 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PrnpP04925 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.36□□□□□ -0.27
PrnpP04925 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.36□□□□□ -0.27
PrnpP04925 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PrnpP04925 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PrnpP04925 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrnpP04925 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.35□□□□□ -0.27
PrnpP04925 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.35□□□□□ -0.27
PrnpP04925 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PrnpP04925 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PrnpP04925 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.35□□□□□ -0.27
PrnpP04925 Gm13996-201ENSMUST00000118456 430 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms