Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.82□□□□□ -0.68
CfdP03953 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CfdP03953 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CfdP03953 Gm25911-201ENSMUST00000157621 56 ntBASIC10.81□□□□□ -0.68
CfdP03953 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Gm27622-201ENSMUST00000183779 60 ntBASIC10.81□□□□□ -0.68
CfdP03953 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.81□□□□□ -0.68
CfdP03953 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.81□□□□□ -0.68
CfdP03953 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.81□□□□□ -0.68
CfdP03953 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.81□□□□□ -0.68
CfdP03953 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.81□□□□□ -0.68
CfdP03953 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CfdP03953 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.81□□□□□ -0.68
CfdP03953 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CfdP03953 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.81□□□□□ -0.68
CfdP03953 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
CfdP03953 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CfdP03953 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm6415-201ENSMUST00000118488 348 ntBASIC10.8□□□□□ -0.68
CfdP03953 Gm11779-201ENSMUST00000118541 368 ntBASIC10.8□□□□□ -0.68
CfdP03953 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.8□□□□□ -0.68
CfdP03953 Gm15693-201ENSMUST00000120470 637 ntBASIC10.8□□□□□ -0.68
CfdP03953 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm38144-201ENSMUST00000192790 465 ntBASIC10.8□□□□□ -0.68
CfdP03953 Gm44335-201ENSMUST00000196879 141 ntBASIC10.8□□□□□ -0.68
CfdP03953 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm44297-201ENSMUST00000198304 141 ntBASIC10.8□□□□□ -0.68
CfdP03953 Gm44346-201ENSMUST00000198851 141 ntBASIC10.8□□□□□ -0.68
CfdP03953 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.8□□□□□ -0.68
CfdP03953 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Mzt1-203ENSMUST00000227948 952 ntBASIC10.8□□□□□ -0.68
CfdP03953 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CfdP03953 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.8□□□□□ -0.68
CfdP03953 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CfdP03953 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms