Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.14□□□□□ -0.63
H3f3cP02301 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H3f3cP02301 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.14□□□□□ -0.63
H3f3cP02301 Gm11978-201ENSMUST00000122315 466 ntBASIC11.14□□□□□ -0.63
H3f3cP02301 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
H3f3cP02301 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.14□□□□□ -0.63
H3f3cP02301 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.14□□□□□ -0.63
H3f3cP02301 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H3f3cP02301 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
H3f3cP02301 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H3f3cP02301 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H3f3cP02301 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
H3f3cP02301 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.13□□□□□ -0.63
H3f3cP02301 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
H3f3cP02301 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.13□□□□□ -0.63
H3f3cP02301 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.13□□□□□ -0.63
H3f3cP02301 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
H3f3cP02301 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
H3f3cP02301 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.13□□□□□ -0.63
H3f3cP02301 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Gm16202-201ENSMUST00000117532 544 ntBASIC11.13□□□□□ -0.63
H3f3cP02301 Gm11803-201ENSMUST00000119966 444 ntBASIC11.13□□□□□ -0.63
H3f3cP02301 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.13□□□□□ -0.63
H3f3cP02301 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.13□□□□□ -0.63
H3f3cP02301 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.13□□□□□ -0.63
H3f3cP02301 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H3f3cP02301 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
H3f3cP02301 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.12□□□□□ -0.63
H3f3cP02301 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.12□□□□□ -0.63
H3f3cP02301 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.12□□□□□ -0.63
H3f3cP02301 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.12□□□□□ -0.63
H3f3cP02301 Gm7561-201ENSMUST00000211203 886 ntBASIC11.12□□□□□ -0.63
H3f3cP02301 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
H3f3cP02301 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
H3f3cP02301 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms